Insertion junction: CLIP2.068181_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068181
Chromosome:chromosome 10
Location:377194
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTCGATCCCACCCCCACTCCCCACAGACCAGACGCACATCTCCTGG
Internal bar code:GCACGGTAGTGGGAACGAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTGGAAGTATACGCCC
Suggested primer 2:CTACTCCCCCATCCCTCACA