Insertion junction: CLIP2.068182_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068182
Chromosome:chromosome 16
Location:4909058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686800 PTA2 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter, splice variant b 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGACCCTTTCTGTTCGTCATGCCAACGGCAATGCCGAAATGCAGTCT
Internal bar code:TGTGCGGTCTCCGACGGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:2.34375
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:125
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACACCAACCGTCTTGCC
Suggested primer 2:TCCATCGTCATGCCCATAGC