Insertion junction: CLIP2.068186_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068186
Chromosome:chromosome 3
Location:8539257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211297 5'UTR
Cre03.g211409 PPR15,mS106,MRPS106 Mitochondrial ribosomal protein S106, Chlamydomonas specific 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGGGCAGCACCGCGACTGCCAGCAGCCCTGGGGCGTCCGCGACTGC
Internal bar code:GCGTCTCTGAAGGACGGTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3896
LEAP-Seq percent confirming:96.6443
LEAP-Seq n confirming:144
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:149

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGCCCTTCCTGGTTAC
Suggested primer 2:GGAGTGTACTTATCGGCCCG