Insertion junction: CLIP2.068186_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068186
Chromosome:chromosome 3
Location:8539263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211297 5'UTR
Cre03.g211409 PPR15,mS106,MRPS106 Mitochondrial ribosomal protein S106, Chlamydomonas specific 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGAGAGCTGTGGCCATTCCCATCGCCGCACCCGTCTAGGGGTTCTGC
Internal bar code:CTACCAAAGAGAGTAAGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3811
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGTACTTATCGGCCCG
Suggested primer 2:TTGACGCCCTTCCTGGTTAC