Insertion junction: CLIP2.068190_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068190
Chromosome:chromosome 9
Location:2004515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396800 CSE19 Predicted protein of CSE family 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTTGAATGCCACGGTGGGGGCTTTGGCTTGGAAGCGCGGGTTGTGC
Internal bar code:GTGCCGGTCGTAATAGCAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCGACGTGTTCTTAGA
Suggested primer 2:TAAGCTGGCAGTTGGAGTGG