Insertion junction: CLIP2.068200_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068200
Chromosome:chromosome 11
Location:2555584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095095 PHC12 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 12 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGCGTTAGCCGCGCTAACGCGCGGCAAGGGTGCGGTCTAGCTGCAC
Internal bar code:AAGGTCCTGCCTACTCTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTTTCTTCACCCTGCGG
Suggested primer 2:GACCGTGACCAGAAGAGTGG