Insertion junction: CLIP2.068200_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068200
Chromosome:chromosome 11
Location:2555585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095095 PHC12 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 12 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTCCTCCTCCTCACCCGTCTGTTGCAAGGATGCCGAGTCAGTCATA
Internal bar code:AAGGTCCTGCCTACTCTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1384
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGTGACCAGAAGAGTGG
Suggested primer 2:ATCCTTTCTTCACCCTGCGG