Insertion junction: CLIP2.068204_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068204
Chromosome:chromosome 13
Location:4897555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605350 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTTGCGCCGATGGGGAGGGGGGGCATTGGGGGGAGGGGCACTCCCTC
Internal bar code:TCGGCACGGGTTTGGACCAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1645
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTTGCGGTTTGGCATTC
Suggested primer 2:TGGTGTCCGGACTGTCAATG