Insertion junction: CLIP2.068207_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068207
Chromosome:chromosome 1
Location:3358463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021750 (1 of 1) PF07818 - HCNGP-like protein (HCNGP) 3'UTR
Cre01.g021800 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCTGACGTGACAGCGTGTGGCAGCAAGGCGCAACACAGGCCTACAG
Internal bar code:GCGGGTGGAAACTCAGTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:53.125
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGATGTTGTGTTGGC
Suggested primer 2:GATAAGGTCGCAGGCTCGAA