Insertion junction: CLIP2.068210_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068210
Chromosome:chromosome 9
Location:5797165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411250 (1 of 60) IPR001611 - Leucine-rich repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGCGGTCAGCCCTGTGGCCTTGTGGCAAAGGAAAGGCTTTTGTGT
Internal bar code:CCGCGACTCGGCCCGCGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTTGTCAGCGCGATCG
Suggested primer 2:CCCAATCCCTTTCACCCTCC