Insertion junction: CLIP2.068214_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068214
Chromosome:plastome
Location:101748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802308 ChreCp044,2716995,psbL photosystem II reaction center subunit XII; (1 of 1) K02713 - photosystem II PsbL protein (psbL) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCAACTGACGTCCTAATTTATGGACTTTTTTAGAACTGCCTGCAGCTT
Internal bar code:TTAAATATTTCCGACTTGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3139
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTTAGGACGGCAGTGGC
Suggested primer 2:CGTTGGTTAGCTATCCACGGT