Insertion junction: CLIP2.068215_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068215
Chromosome:chromosome 16
Location:3019711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664000 HLM25 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase; Histone-lysine N-methyltransferase 3'UTR
Cre16.g664050 (1 of 1) PF02893//PF16016 - GRAM domain (GRAM) // Domain of unknown function (DUF4782) (DUF4782) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCGAACCCCTGAAATCGGCACAGGGGCAGGCGAAGAGCCGCAATGCC
Internal bar code:CGTGTAACAACATTCACTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2215
LEAP-Seq percent confirming:98.2301
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACAGAACGAGCGTGCAA
Suggested primer 2:AGAACGTGGACGGGTAAACC