Insertion junction: CLIP2.068222_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068222
Chromosome:chromosome 11
Location:484777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467591 (1 of 1) K12840 - splicing factor 45 (RBM17, SPF45) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAACTCTTAAACGATGCGGTTGCAATTAAGTTTGTGAGCTGGCCACT
Internal bar code:GTAGGAGTGAAATAGGGTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAACCCACGTAGAGCAA
Suggested primer 2:TGTCGTTTTTCCCCGAGGAG