Insertion junction: CLIP2.068233_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068233
Chromosome:chromosome 13
Location:600842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565650 (1 of 1) 2.5.1.84//2.5.1.85 - All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) / Solanesyl-diphosphate synthase // All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) / Solanesyl diphosphate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTGGCGACGGGTTACCCACGTTCCGCCGAACCACCCCGTCCATCCA
Internal bar code:ACGGGCGCGAAAGTTCTTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTCACTCGCATTGGGTT
Suggested primer 2:GCTACAGGTCTCGATGGTCG