Insertion junction: CLIP2.068238_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068238
Chromosome:chromosome 12
Location:1487428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488000 FFT4 putative fructan fructosyltransferase; (1 of 2) 2.4.1.99 - Sucrose:sucrose fructosyltransferase / Sucrose:sucrose 1-fructosyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTTATTCGACCTGCGTGGCCCCTAGCAGCTGCAGGCGCGGCGTCCGT
Internal bar code:TATAGGTTAGGAATAGTGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGTCCGAACGACCAGA
Suggested primer 2:CAAGACCTGCATGCCACCTA