Insertion junction: CLIP2.068240_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068240
Chromosome:chromosome 12
Location:5215962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527200 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGATATGTGCACCGCTTGTTGGAGGCTGTTCGGCCCGAAAGCTTGAA
Internal bar code:TGAATTCTCATCTCGGCCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2680
LEAP-Seq percent confirming:55.2083
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAATGTGGTCGTGGCTGG
Suggested primer 2:GCAACCTAGTCACCGGGTAC