Insertion junction: CLIP2.068240_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068240
Chromosome:chromosome 12
Location:5215967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527200 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAAATCAGGATAATGCATCCACTAAGACAGCAATACCGCGTGTCGGA
Internal bar code:TGAATTCTCATCTCGGCCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2101
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCTAGTCACCGGGTAC
Suggested primer 2:AGTAATGTGGTCGTGGCTGG