Insertion junction: CLIP2.068243_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068243
Chromosome:chromosome 1
Location:2031898
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g011150 (1 of 2) IPR000104//IPR011598 - Antifreeze protein, type I // Myc-type, basic helix-loop-helix (bHLH) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGCTGCGCCGCTGGGCTCGCTGGCCATCGTAAAGCAGGAGCCGTCGG
Internal bar code:AGGATCGTCTACGTCTGCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTTGCTGCTGCTGTTG
Suggested primer 2:GACGCCCGGCTCACATTATA