Insertion junction: CLIP2.068244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068244
Chromosome:chromosome 17
Location:4046979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGCAGCCCCAAGTTCAAAGCCCAAGGGTCGAAGTGCAAACCCAAACG
Internal bar code:TCTTTTTAAGGATTATCAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:1.04167
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:95
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGGCACTTCACTTCAT
Suggested primer 2:TATCTTGGTCGGCGATCGTG