Insertion junction: CLIP2.068253_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068253
Chromosome:chromosome 3
Location:8744553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208049 (1 of 1) IPR000104//IPR000644//IPR007263 - Antifreeze protein, type I // CBS domain // Protein of unknown function DUF393 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAAGAAGCGGGCTGAAGTCCCGGTCAGCATCAGAGTAACACAGACAC
Internal bar code:TTGTGGTGGCATTCAAGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2295
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGACAGGGTGATTCGG
Suggested primer 2:GTGCCTCGTGTGTTGTAGGA