Insertion junction: CLIP2.068274_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068274
Chromosome:chromosome 6
Location:6192869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292050 MMP21 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGACAACTACATAACACTTATACAGTGTCGGAGCGTGTTGTGACGGCA
Internal bar code:TAAAGGTTAAATGCATACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4028
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGATGGAAAGCTCCCGGG
Suggested primer 2:GCGTAGTCGTGAACATTCGC