Insertion junction: CLIP2.068276_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068276
Chromosome:chromosome 7
Location:911511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318900 DNJ2 (1 of 1) PF00226//PF13637 - DnaJ domain (DnaJ) // Ankyrin repeats (many copies) (Ank_4); DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAGAGGCGCGACGTGATGGCAGGTTCCAAGAAGAAAAAGTCTGAGCC
Internal bar code:CCTAGGGAAATTGTGCTTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGCCAGTCTGGTCGTA
Suggested primer 2:TTGCATGCTGGGTGATGGAT