Insertion junction: CLIP2.068276_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068276
Chromosome:chromosome 7
Location:911528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318900 DNJ2 (1 of 1) PF00226//PF13637 - DnaJ domain (DnaJ) // Ankyrin repeats (many copies) (Ank_4); DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGGTATGCATTTAAATATGTATGTACAACAATGCTCTGGCAGGGGT
Internal bar code:GGTATCAAAGGACTTAATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCATGCTGGGTGATGGAT
Suggested primer 2:GTTGTGCCAGTCTGGTCGTA