Insertion junction: CLIP2.068277_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068277
Chromosome:chromosome 13
Location:2486270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579800 (1 of 1) 2.7.4.26 - Isopentenyl phosphate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGACGACATGTGCGCGTACGGAGCGGCCGAGTTAGGCCGTTGGCCTAA
Internal bar code:AGTTAACCTACGTTTGTAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTCAGATACCGCGCTA
Suggested primer 2:ACAAATGGCGGCTTTGTTCC