Insertion junction: CLIP2.068286_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068286
Chromosome:chromosome 12
Location:2720883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504850 HFO16 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCACCTCTTTGCCTTTGGTTGTGCCTCGGGTGCTGGCCAGGGCGTGG
Internal bar code:ACCTGCTGATTCTCGGTAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2818
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTGCTCAAGTCTGTGT
Suggested primer 2:GAGGCTGAGAACGATCGGAG