Insertion junction: CLIP2.068288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068288
Chromosome:chromosome 10
Location:6188137
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g462816 (1 of 2) IPR007112//IPR007117//IPR009009 - Expansin/pollen allergen, DPBB domain // Expansin, cellulose-binding-like domain // RlpA-like double-psi beta-barrel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATACAAGCACACGCACGCCTCCTCACCCACCCACGCACGCATCCACG
Internal bar code:TTGTGGTAATGTCTCTCTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:422
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCCAACGAGATAGGTC
Suggested primer 2:GACCCAAACGCCAACTTCAC