Insertion junction: CLIP2.068293_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068293
Chromosome:chromosome 6
Location:6610484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294650 AGT1 Alanine-glyoxylate transaminase; (1 of 2) K00830 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase (AGXT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGATGATTACTCCGAATGCTTCTGCGAAAAACTGCGTGTAGAGCCTG
Internal bar code:TAGATTGTTATTTCAATATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1373
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGATAGCGAGCTTAGCAA
Suggested primer 2:TTGCTTGAGGACAGAGCCTG