Insertion junction: CLIP2.068305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068305
Chromosome:chromosome 4
Location:1502842
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g213750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCGTGCCACCGCCGCAGTCGCTGCTACTGCCGCTATTGCCACCGGC
Internal bar code:GAATATGTTAAGTTCTATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACACTCAGGGCATGCAG
Suggested primer 2:CTGGCTGTAGCAGTCGTAGG