Insertion junction: CLIP2.068305_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068305
Chromosome:chromosome 9
Location:2835874
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTCTGGGCCAAGCCTGCCGGTGACGCAGCAGCGCAGCTTGTGCTCCG
Internal bar code:ATTTTGCCAGCGTTGTGAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAATGAAGACAGTCCGG
Suggested primer 2:AGGGAGGAATACACGGACGA