Insertion junction: CLIP2.068312_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068312
Chromosome:chromosome 7
Location:2704961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331050 (1 of 1) IPR000104//IPR001487 - Antifreeze protein, type I // Bromodomain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGCGAGTGCATCACCCCCACGGCGGTCAATAGCCATACTACCTAGTG
Internal bar code:GTTAAACGGTGCGGGATAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTCATGTTGCTTGT
Suggested primer 2:GAGCTGACGACTACTACCGC