Insertion junction: CLIP2.068321_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068321
Chromosome:chromosome 6
Location:2667056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) intron
lncRNA_TCONS_00027203 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATAACCAGCAGTCACGCACATGTGCACATGTTGTTAGTTTTGCGATT
Internal bar code:GTGTAAAGTCGGAAACCTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2082
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGAAGCAGTCGTGGGAGA
Suggested primer 2:ATAAAGCTAGGCCTCGACGC