Insertion junction: CLIP2.068326_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068326
Chromosome:chromosome 14
Location:4119762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633850 (1 of 1) PF14768 - Replication protein A interacting C-terminal (RPA_interact_C) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGGCTGGCTCGATCGTACGCGCATGCAAAAAGCGAAATCAGTAAAAT
Internal bar code:AATTCAATAGAACGACACCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAACGTATGGGCCTAGAC
Suggested primer 2:TGATGTGAGGCGATGTGAGG