Insertion junction: CLIP2.068336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068336
Chromosome:chromosome 8
Location:3449046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378450 (1 of 1) IPR000104//IPR000679 - Antifreeze protein, type I // Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGAGCGGTGATGGCCGCAAGTCCTCCGCAGCAGCATTGAGGATGCAG
Internal bar code:TTTCGTGCTCGAGTTACCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGATGTTGTGGGCGAGG
Suggested primer 2:CTCTCAGGCATGGCTTGGAA