Insertion junction: CLIP2.068336_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068336
Chromosome:chromosome 8
Location:3449056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378450 (1 of 1) IPR000104//IPR000679 - Antifreeze protein, type I // Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTCCTACCCTGTTCGGCGGGAAAAGAACAGGCGGCCCGCCGACCGTG
Internal bar code:TTTCGTGCTCGAGTTACCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCAGGCATGGCTTGGAA
Suggested primer 2:AGAAGATGTTGTGGGCGAGG