Insertion junction: CLIP2.068341_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068341
Chromosome:chromosome 7
Location:2232800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327350 CDPK8 Calcium/calmodulin-dependent protein kinase; (1 of 1) K04515 - calcium/calmodulin-dependent protein kinase (CaM kinase) II (CAMK2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGCAACACCCTGACCTCCGGCATCACTTAAAACGACGAGCGACGCC
Internal bar code:AATATGAACATAAGGTTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3999
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGGAGAAGAAGGACGG
Suggested primer 2:TTAGGGTCTTTGCTGGCGAG