Insertion junction: CLIP2.068342_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068342
Chromosome:chromosome 8
Location:3807716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGAACAGCCCTAGAAATGCTCTTCTTTGCCGTCGATAAGCTCAGGTGC
Internal bar code:CTAGCGCAATTGACTATGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3200
LEAP-Seq percent confirming:55.914
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACCCTGTCCCATCAC
Suggested primer 2:GATAGATGGGGGCGGACAAG