Insertion junction: CLIP2.068346_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068346
Chromosome:chromosome 12
Location:3521654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496650 (1 of 5) PF04116 - Fatty acid hydroxylase superfamily (FA_hydroxylase) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGATCGCGCCCGGCCCTGCAGCGCACGCCCATTACCGGTAGTCTCAA
Internal bar code:CTTGCGGCTATCGTACATTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3558
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAGGACCACAGCAAGGGC
Suggested primer 2:TTGCTTGCCTTGCACATGAC