Insertion junction: CLIP2.068347_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068347
Chromosome:chromosome 14
Location:1991214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620850 NSG17 (1 of 9) PF00010 - Helix-loop-helix DNA-binding domain (HLH); Basic helix-loop-helix transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCTTAATTCCACCGCAGCCGCGGCTCCGAACTGTGCCGGCAAAGGCA
Internal bar code:CCGTTTGTCAGTCCGTTGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5609
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGATTCCGGGTGTGACG
Suggested primer 2:CACCAGCCTTCTGTTTTGGC