Insertion junction: CLIP2.068350_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068350
Chromosome:chromosome 12
Location:7440869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557000 ATG12,APG12 Autophagy-related protein; (1 of 1) K08336 - ubiquitin-like protein ATG12 (ATG12) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGGAATTATATCTAACTTCAATACCAAACAACTCTTATGGCAGCAGC
Internal bar code:TCGGAATTCTCCACGTACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACATCAGACCCTTCCACCC
Suggested primer 2:ACGGAGTACACCCAGGCTAT