Insertion junction: CLIP2.068350_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068350
Chromosome:chromosome 12
Location:7440871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557000 ATG12,APG12 Autophagy-related protein; (1 of 1) K08336 - ubiquitin-like protein ATG12 (ATG12) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCTCATTCGTCGTGGGGCGTAGTTCACCTGTTAGCAAAATTGCAG
Internal bar code:TCGGAATTCTCCACGTACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1625
LEAP-Seq percent confirming:39.2857
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAGTACACCCAGGCTAT
Suggested primer 2:CACATCAGACCCTTCCACCC