Insertion junction: CLIP2.068357_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068357
Chromosome:chromosome 3
Location:6275184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191850 SDR8 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.184//1.1.1.300 - Carbonyl reductase (NADPH) / Xenobiotic ketone reductase // NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCAAATTTTCGGGGACGCCACCGCCTCCGTCACCGCCACCGCCAGCC
Internal bar code:GGCCCCACGTTTAACAGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1720
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCGCATAGCTTGAGAGG
Suggested primer 2:AGCTGTGGTGATAAGGTGCC