Insertion junction: CLIP2.068371_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068371
Chromosome:chromosome 12
Location:1583694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487200 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat 5'UTR
Cre12.g487250 (1 of 1) PF06454 - Protein of unknown function (DUF1084) (DUF1084) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATACTGGAGCGTTCTGGAGAGGACGTGTTCTGTATGTGTGTAAAACAG
Internal bar code:ATCGTTAGGTTATAGCTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCTCGATGCCTCCATTC
Suggested primer 2:CTGTGGAGCAGGAGGAAAGG