Insertion junction: CLIP2.068372_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068372
Chromosome:chromosome 14
Location:3665118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631200 IC97,FAP94,DII6 (1 of 1) K17580 - cancer susceptibility candidate protein 1 (CASC1); Flagellar Inner Arm Dynein I1/f intermediate chain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCAGGGGAACCCCTGTCTCCCGCCGTCAACACCCATAGATACAGCCC
Internal bar code:GCAAGGTTTAGACTTGCAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCAGCCGGTAGTTAGCCT
Suggested primer 2:GGTCCCACGAAGTTTTGCAC