Insertion junction: CLIP2.068372_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068372
Chromosome:chromosome 14
Location:3665125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631200 IC97,FAP94,DII6 (1 of 1) K17580 - cancer susceptibility candidate protein 1 (CASC1); Flagellar Inner Arm Dynein I1/f intermediate chain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGGGAGAGTGAGGTTGGGTCGGCGGCAAGCAGGGGAGGAGTGGGCG
Internal bar code:GCGTCACAGGTTGACGGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCCACGAAGTTTTGCAC
Suggested primer 2:TCTCAGCCGGTAGTTAGCCT