Insertion junction: CLIP2.068373_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068373
Chromosome:chromosome 11
Location:1945132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467779 (1 of 1) 3.2.1.52 - Beta-N-acetylhexosaminidase / N-acetyl-beta-glucosaminidase 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTCCGGTACGCCGCCGCTGCATGACTGACTCCACCGTTGGACCTGC
Internal bar code:TTATTATGGGCATTTGGTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGTCATATCACCCAGGA
Suggested primer 2:GCCCCACCACCACATCATTA