Insertion junction: CLIP2.068374_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068374
Chromosome:chromosome 16
Location:5412975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGACGGCGGAATGTCTTTGGTGGGCTAGTCGGGCGGGGCACTCAGGA
Internal bar code:TATTGAGAGTCTATACAGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1895
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAGACATGTTGGTTTGT
Suggested primer 2:GTCTCGGCAGGAGTCTTCAG