Insertion junction: CLIP2.068375_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068375
Chromosome:chromosome 17
Location:2103674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802047 (1 of 14) IPR002156//IPR012337 - Ribonuclease H domain // Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTACCTAGTTTGCGCGGTGGTCTTTTGCCTGGTGTAGTCCAGTATGAC
Internal bar code:ACATCTTCGGTTCTAAAAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4510
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCCGGTATCTGGTTTG
Suggested primer 2:GGTCTTCCCATTCCACCAGG