Insertion junction: CLIP2.068375_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068375
Chromosome:chromosome 17
Location:2103675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802047 (1 of 14) IPR002156//IPR012337 - Ribonuclease H domain // Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTACTGAACCAGCCAGTTTTGCCTGCGTCAGGGGTGTGGGGCTGAGTC
Internal bar code:TGAATATGCTTTCGGAACTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:65.3061
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTTCCCATTCCACCAGG
Suggested primer 2:ACCTGCCGGTATCTGGTTTG