Insertion junction: CLIP2.068378_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068378
Chromosome:chromosome 2
Location:5143290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111650 CGL8 (1 of 2) PTHR10783//PTHR10783:SF44 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SPX DOMAIN-CONTAINING PROTEIN 1-RELATED; SPX containing protein 5'UTR
Cre02.g111700 EFH1 (1 of 3) PF13202//PF13499 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7); EF-hand Calcium binding protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGCAACAGTGGGGCCACGGTATACGAGCAGTCCAGGCCGTGAAGTT
Internal bar code:TGTTTTGAGCAGCGAGTCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGCTTGTGTGCTAAA
Suggested primer 2:AGCTGAATGACGCAGGTCTC