Insertion junction: CLIP2.068379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068379
Chromosome:chromosome 10
Location:1212036
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g426250 (1 of 1) K14800 - pre-rRNA-processing protein TSR2 (TSR2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGTGTACCAGCCCCTCTTCGTGTCAGTCAGAAAGCAGCTAGCACGC
Internal bar code:AATATGAAGCAGATATAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGGTAACCCCTCCCTT
Suggested primer 2:GTTTGGACACACGTCACAGC